Publications

(Things I used to do)

Webb SC, Attwood A, Brooks T, Freeman T, Gardner P, Pritchard C, Williams D, Underhill P, Strivens MA, Greenfield A, Pilicheva E.
LIMaS: the JAVA-based application and database for microarray experiment tracking.
Mamm Genome. 2004 Sep;15(9):740-7.

Maywood ES, Chahad-Ehlers S, Garabette ML, Pritchard C, Underhill P, Greenfield A, Ebling FJ, Akhtar RA, Kyriacou CP, Hastings MH, Reddy AB.
Differential testicular gene expression in seasonal fertility.
J Biol Rhythms. 2009 Apr; 24(2):114-25.

Pritchard C, Underhill P, Greenfield A.
Using DNA microarrays.
Methods Mol Biol. 2008; 461:605- 29

Stylianou IM, Clinton M, Keightley PD, Pritchard C, Tymowska-Lalanne Z, Bünger L, Horvat S.
Microarray gene expression analysis of the Fob3b obesity QTL identifies positional candidate gene Sqle and perturbed cholesterol and glycolysis pathways.
Physiol Genomics. 2005 Feb 10;20(3):224-32. Epub 2004 Dec 14.

Blanco G, Pritchard C, Underhill P, Breeds S, Townsend KM, Greenfield A, Brown SD.
Molecular phenotyping of the mouse ky mutant reveals UCP1 upregulation at the neuromuscular junctions of dystrophic soleus muscle.
Neuromuscul Disord. 2004 Mar; 14(3):217-28.
 
Case-Green S, Pritchard C, Southern E.
Oligonucleotide arrays for genotyping: enzymatic methods for typing single nucleotide polymorphisms and short tandem repeats.
Methods Mol Biol. 2003; 226:255-70.

Smith L, Underhill P, Pritchard C, Tymowska-Lalanne Z, Abdul-Hussein S, Hilton H, Winchester L, Williams D, Freeman T, Webb S, Greenfield A.
Single primer amplification (SPA) of cDNA for microarray expression analysis.
Nucleic Acids Res. 2003 Feb 1; 31(3):e9.

Case-Green SC, Mir KU, Pritchard CE, Southern EM.
Analysing genetic information with DNA arrays.
Curr Opin Chem Biol. 1998 Jun; 2(3):404-10. Review.

Pritchard CE, Southern EM.
Effects of base mismatches on joining of short oligodeoxynucleotides by DNA ligases.
Nucleic Acids Res. 1997 Sep 1; 25(17):3403-7.
 
Pritchard CE, Grasby JA, Hamy F, Zacharek AM, Singh M, Karn J, Gait MJ.
Methylphosphonate mapping of phosphate contacts critical for RNA recognition by the human immunodeficiency virus tat and rev proteins.
Nucleic Acids Res. 1994 Jul 11; 22(13):2592-600.

Evans PR, Oubridge C, Jessen TH, Li J, Teo CH, Pritchard C, Ito N, Nagai K.
Model of the interaction between the UI A small nuclear ribonucleoprotein and UI small nuclear RNA stem/loop II.
Biochem Soc Trans. 1993 Aug;21 ( Pt 3)(3):605-9.

Hamy F, Asseline U, Grasby J, Iwai S, Pritchard C, Slim G, Butler PJ, Karn J, Gait MJ.
Hydrogen-bonding contacts in the major groove are required for human immunodeficiency virus type-1 tat protein recognition of TAR RNA.
J Mol Biol. 1993 Mar 5; 230(1):111-23.

Asseline U, Grasby J, Hamy F, Iwai S, Mann DA, Pritchard C, Karn J, Gait MJ.
HIV gene regulatory proteins tat and rev and their interactions with synthetic RNA.
Nucleic Acids Symp Ser. 1993; (29):113-4.

Iwai S, Pritchard C, Mann DA, Karn J, Gait MJ.
Recognition of the high affinity binding site in rev-response element RNA by the human immunodeficiency virus type-1 rev protein.
Nucleic Acids Res. 1992 Dec 25;20(24):6465-72.

Jessen TH, Oubridge C, Teo CH, Pritchard C, Nagai K.
Identification of molecular contacts between the U1 A small nuclear ribonucleoprotein and U1 RNA.
EMBO J. 1991 Nov; 10(11):3447-56.

Will DW, Pritchard CE, Brown T.
The synthesis of oligonucleotides that contain 2,4-dinitrophenyl reporter groups.
Carbohydr Res. 1991 Sep 2; 216:315-22.

Slim G, Pritchard C, Biala E, Asseline U, Gait MJ.
Synthesis of site-specifically modified oligoribonucleotides for studies of the recognition of TAR RNA by HIV-1 tat protein and studies of hammerhead ribozymes.
Nucleic Acids Symp Ser. 1991; (24):55-8.

Tom Brown, Clare E. Pritchard, Gillian Turner, Stephen A. Salisbury.
A new base-stable linker for solid-phase oligonucleotide synthesis.
 J. Chem. Soc., Chem. Commun., 1989, (14),891-893